PDBA
database
PDBA database holds
annotated PQS entries.
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This is version 6, updated January 4, 2007 using
January 3, 2007, release of PQS
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It has 34166 PQS entries, annotated
using version 51.3 of UniProtKB/Swiss-Prot
, version 20.2 of Prosite and
Dec 30, 2006 version of PDB/SwissProt Cross reference
from IMB Jena Image Library Project
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Only the first macromolecule from PQS is used
for related PDB entry
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For PDB entries of virus samples *.unique
PQS files are used (that contains just those symmetry generated repeats
that together describe all possible inter-chain contacts)
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(1015) PQS entries having no aminoacids in them are
not annotated
Availability of annotations for PQS entries (abundant is for ProSite patterns with a high probability of occurrence and "ProSite non-abundant feature" is for structures having no SwissProt annotations, but having at least one ProSite non-abundant feature) :
Thu Jan 4 2007, R.Gabdoulline